[QUERY LOCUS] MAGPIE:pirsfhmmx--Brassica--Oleracea_contig_singlet--ES945933
[QTEXT] MAGPIE:pirsfhmmx--Brassica--Oleracea_contig_singlet--ES945933
[SEARCH TYPE] AA (AMINO ACID)
[SCALE FACTOR] 1
[SCORES]
RANK SCORES QF TARGET LOCUS NAME ACCESSION# TF TARGET E_VALUE DESCRIPTION
1 -8.28 D UCP019317 PIRSF01931 1 pirsf 1.2e-013 Uncharacterised conserved protein, UCP019317 type
2 -8.36 C FTZ-F1 PIRSF00253 1 pirsf 8.4e-011 Orphan nuclear receptor Fushi-tarazu factor 1
3 -8.44 D Fhx_P25 PIRSF00888 1 pirsf 1.3e-012 Fibrohexamerin (P25)
4 -8.80 C Agal PIRSF00553 1 pirsf 8.6e-024 Alpha-galactosidase
5 -8.84 C DiGMP_Pdiesterase_YuxH PIRSF00318 1 pirsf 5.0e-013 Predicted signal transduction c-di-GMP phosphodieste
6 -8.84 D Pro_dehydrog PIRSF00019 1 pirsf 2.1e-013 Predicted proline dehydrogenase
[BEGIN ALIGNMENTS TIME] Wed Jul 2 00:51:20 2008
[ALIGNMENTS]
_________________________________________________________________________
RANK 1 Score = -8.28 E_Value = 1.2e-013
Q = SOC_xdong_0069075589.seq QF = D #Q Symbols = 498
T = UCP019317 TF = 1 #T Symbols = 745
A = PIRSF019317
D = Uncharacterised conserved protein, UCP019317 type
Identical Match = 5 Similar = 8 Total # Of Gaps = 0
Identity: Alignment = 50% Query = 3% Target = 0%
Similarity: Alignment = 80% Query = 4% Target = 1%
QS = 139 QE = 168 TS = 1 TE = 10
Q 139 ATGCGAATAGTATTCGCACTATTGATGGTG
|||||| |||...||||||......
T 1 MetArgMetTyrPheThrLeuLeuLeuPhe
_________________________________________________________________________
RANK 2 Score = -8.36 E_Value = 8.4e-011
Q = SOC_xdong_0069075589.seq QF = C #Q Symbols = 498
T = FTZ-F1 TF = 1 #T Symbols = 566
A = PIRSF002530
D = Orphan nuclear receptor Fushi-tarazu factor 1
Identical Match = 8 Similar = 19 Total # Of Gaps = 0
Identity: Alignment = 22% Query = 4% Target = 1%
Similarity: Alignment = 52% Query = 11% Target = 3%
QS = 165 QE = 272 TS = 1 TE = 36
Q 165 CCTTCAAACTCAGGATCAGGAACCTTGACTGAGACAATGCAGGTCAATCCCTCTCTAACA
...||| .........||| ...||||||
T 1 MetGlyAsnLysIleHisAlaGlnPheLysPheThrProSerHisAlaArgSerLeuHis
Q 225 TGTTCCCCACTTAAGCTAATATCCTTCTCCTTGATAACCTTTAACTTT
||| ... ... ...|||||| ...... ...|||
T 21 CysPheMetCysSerMetMetPhePheSerMetMetSerThrProPhe
_________________________________________________________________________
RANK 3 Score = -8.44 E_Value = 1.3e-012
Q = SOC_xdong_0069075589.seq QF = D #Q Symbols = 498
T = Fhx_P25 TF = 1 #T Symbols = 221
A = PIRSF008881
D = Fibrohexamerin (P25)
Identical Match = 3 Similar = 6 Total # Of Gaps = 0
Identity: Alignment = 42% Query = 1% Target = 1%
Similarity: Alignment = 85% Query = 3% Target = 2%
QS = 101 QE = 121 TS = 1 TE = 7
Q 101 ATGGTGCTCAGATGCCTATTC
||| |||...|||......
T 1 MetMetLeuLysCysPheIle
_________________________________________________________________________
RANK 4 Score = -8.80 E_Value = 8.6e-024
Q = SOC_xdong_0069075589.seq QF = C #Q Symbols = 498
T = Agal TF = 1 #T Symbols = 764
A = PIRSF005536
D = Alpha-galactosidase
Identical Match = 4 Similar = 10 Total # Of Gaps = 0
Identity: Alignment = 30% Query = 2% Target = 0%
Similarity: Alignment = 76% Query = 6% Target = 1%
QS = 252 QE = 290 TS = 1 TE = 13
Q 252 TCCTTGATAACCTTTAACTTTTTTGCGAGGCTATTTAGA
...||||||......... ...||||||...
T 1 MetProIleThrTyrHisMetAsnThrLysLeuPheHis
_________________________________________________________________________
RANK 5 Score = -8.84 E_Value = 5.0e-013
Q = SOC_xdong_0069075589.seq QF = C #Q Symbols = 498
T = DiGMP_Pdiesterase_YuxH TF = 1 #T Symbols = 426
A = PIRSF003180
D = Predicted signal transduction c-di-GMP phosphodiesterase with EAL and modified HD-GYP domains
Identical Match = 2 Similar = 9 Total # Of Gaps = 0
Identity: Alignment = 22% Query = 1% Target = 0%
Similarity: Alignment = 100% Query = 5% Target = 2%
QS = 449 QE = 475 TS = 1 TE = 9
Q 449 CACATCATGGAGCGGTTTCTTATCGGT
......|||......|||.........
T 1 MetThrMetMetTyrPheTyrValAla
_________________________________________________________________________
RANK 6 Score = -8.84 E_Value = 2.1e-013
Q = SOC_xdong_0069075589.seq QF = D #Q Symbols = 498
T = Pro_dehydrog TF = 1 #T Symbols = 319
A = PIRSF000196
D = Predicted proline dehydrogenase
Identical Match = 3 Similar = 9 Total # Of Gaps = 0
Identity: Alignment = 33% Query = 1% Target = 0%
Similarity: Alignment = 100% Query = 5% Target = 2%
QS = 430 QE = 456 TS = 1 TE = 9
Q 430 ATGTTCTTGAAAGCATTATTTCCAAAT
||||||.........|||.........
T 1 MetPheMetHisGlnLeuTyrArgAsp
[END ALIGNMENTS TIME] Wed Jul 2 00:51:20 2008
[QUERY SEQUENCE] /decypher/query/SOC_xdong_0069075589.seq
[QUERY LOCUS]