Magpie Automated Genomics Project Investigation Environment

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What's Magpie? How do I use Bluejay?
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For the links provided below, * indicates human functional assignment validation, ^ indicates password restricted

Public Genomes submitted to NCBI, EMBL and DDBJ

Magpie Count: 990 Viruses Bacteria Archaea Eukaryota

ACGC Example Project

ACGC Example Sequences

In Progress/Unsubmitted Genomes

Burkholderia fungorum Burkholderia cepacia Eastern spruce budworm (Choristoneura fumiferana) nucleopolyhedrovirus*^ NRCan Western spruce budworm (Choristoneura occidentalis) granulovirus*^ NRCan Desulfovibrio vulgaris^ Hyperthermus butylicus*^ PolyDNA Virus Laurentian Forestry Centre Monocercomonoides*^ Red headed pine sawfly (Neodiprion lecontei (Fitch)) baculovirus*^ NRCan Thermoproteus tenax*^ Salmonella paratyphi C*^

EST Analysis

Acropora millepora (sister coral)*^ James Cook University Anas (duck)*^ University of Alberta Bovine (Bos taurus) intestinal tract localized expression* U of A Madagascar periwinkle (Catharanthus roseus) various tissues*^ Brock University Sunflower (Helianthus) various species and tissues^ Isotricha protozoa recovered from rumen fluid AAFC Lethbridge Lettuce (Lactuca) various species and tissues^ Mastigamoeba balamuthi novel species characterization* Rockefeller University Gene chip catalogs*^ from the Southern Alberta Microarray Facility Mouse (Mus musculus) stem cell differentiation profiling*^ from the RED project Starlet sea anemone (Nematostella vectensis)*^ Opium poppy (Papaver somniferum)*^ U of C Pine (loblolly, Pinus taeda), various tissues and stages^ Virginia Tech Potato (Solanum tuberosum)^ Genome Atlantic Stevia rebaudiana (Sweet Honey Leaf)^ AAFC London Xenopus genus expression analysis linked from Xenbase

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Default Magpie Homepage On-line Documentation Databases Last Updated Development Site^

Image Credits COE's sequence search resources External Links

MAGPIE is now open source and freely available under the terms of Apache License v2.0
For details, please visit the sourceforge project site .

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This site is currently under construction. Some links may not work temporarily.
For further information, please contact Dr. Christoph Sensen or Paul Gordon (technical).

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Magpie supports the following technologies: DAS